BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C01SP1|AL428178
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1630 1768 0.0
>3x_Contig1630
Length = 14771
Score = 1768 bits (887), Expect = 0.0
Identities = 921/937 (98%), Gaps = 1/937 (0%)
Strand = Plus / Minus
Query: 1 agcatgtatataaaatcacacctggaagttcatgtaccaccgtgtactccatacgtaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8416 agcatgtatataaaatcacacctggaagttcatgtaccaccgtgtactccatacgtaact 8357
Query: 61 gtatctattactaagawatgatttattgaacaagtgctctcgattaattgggagttaatg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8356 gtatctattactaagaaatgatttattgaacaagtgctctcgattaattgggagttaatg 8297
Query: 121 gtgtttctcattgttaaatagatgcaaatgttaatcataacgagtactatatatwatawt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 8296 gtgtttctcattgttaaatagatgcaaatgttaatcataacgagtactatatataataat 8237
Query: 181 tgawgtaaaatagaatatacactctttacttgaggtttcttttgaatttwatttatgatt 240
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8236 tgaagtaaaatagaatatacactctttacttgaggtttcttttgaatttaatttatgatt 8177
Query: 241 aagtttgtggacttttttcaaccactagatctttctccaccggatacaccacttagtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8176 aagtttgtggacttttttcaaccactagatctttctccaccggatacaccacttagtagc 8117
Query: 301 ttttcctctctaatcgcaccagtgcgatcaatgacaggccaatttccccagttcggtaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8116 ttttcctctctaatcgcaccagtgcgatcaatgacaggccaatttccccagttcggtaac 8057
Query: 361 cgcagaattacgcaagtwgcattatcagaatgtttagagctaatagccataacatattgt 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8056 cgcagaattacgcaagtagcattatcagaatgtttagagctaatagccataacatattgt 7997
Query: 421 aaaacttcctgagcacagaagtgtggagaagcagttttcaaacctctattgttcactgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7996 aaaacttcctgagcacagaagtgtggagaagcagttttcaaacctctattgttcactgtg 7937
Query: 481 gaggtgatgagatcacagagttcttgatcgctcatcaattcagttactccgtctgtcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7936 gaggtgatgagatcacagagttcttgatcgctcatcaattcagttactccgtctgtcact 7877
Query: 541 aaacataaganacattcatcaccaccgaactgcaattttgatctttcagcatgtggtaac 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7876 aaacataagaaacattcatcaccaccgaactgcaattttgatctttcagcatgtggtaac 7817
Query: 601 attttggttggt-ccaatgaggtacgaataaatgtccggctcgcacgttagaccatcacg 659
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7816 attttggttggtaccaatgaggtacgaataaatgtccggctcgcacgttagaccatcacg 7757
Query: 660 ttttccgatccgatcgccaaaggatcgtgtatttgcaaaattgttcaaaaatctagtatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7756 ttttccgatccgatcgccaaaggatcgtgtatttgcaaaattgttcaaaaatctagtatc 7697
Query: 720 accgaagagntcagtttggaattgacctccaagtcttctggactctctacttgatgaagg 779
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7696 accgaaggagtcagtttggaattgacctccaagtcttctggactctctacttgatgaagg 7637
Query: 780 atgatgaactttagccaaagaatgagcaataccattcttgtcacaaagtataattttwgt 839
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 7636 atgatgaactttagccaaagaatgagcaataccattcttgtctcgaagtataattttagt 7577
Query: 840 gtcaccgatttgagttacagccagttttagtaagccctgtggtgcaatgaaaaatgattc 899
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7576 gtccccgatttgagttacagccagttttagtaagccctgtggtgcaatgaaaaatgattc 7517
Query: 900 atcgtaacattcttcttcawtataagaggttaaaaaa 936
||||||||||||||||||| |||||||||||||||||
Sbjct: 7516 atcgtaacattcttcttcattataagaggttaaaaaa 7480
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6033
Number of Sequences: 1807
Number of extensions: 6033
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)